STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXO15119.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
KXO15121.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.797
KXO15123.1
Hypothetical protein.
       0.797
KXO15125.1
Putative DNA-binding protein HU; KEGG: apb:SAR116_0173 0.00042 integration host factor subunit alpha K04764; Belongs to the bacterial histone-like protein family.
       0.797
KXO15124.1
Hypothetical protein; KEGG: bpb:bpr_I1662 3.1e-22 topB1; DNA topoisomerase III TopB1; Psort location: Cytoplasmic, score: 8.96.
       0.796
KXO15126.1
Hypothetical protein.
       0.796
KXO15120.1
Hypothetical protein; KEGG: eic:NT01EI_0363 2.2e-26 DNA primase TraC.
       0.786
KXO15122.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.774
KXO15127.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.753
KXO15118.1
MutS domain I protein; KEGG: apb:SAR116_1599 5.1e-12 MutS 1 protein K03555; Psort location: Cytoplasmic, score: 9.97.
       0.518
KXO15117.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.500
Your Current Organism:
Prevotella bivia
NCBI taxonomy Id: 28125
Other names: ATCC 29303, Bacteroides bivius, CCUG 9557, CIP 105105, DSM 20514, JCM 6331, LMG 6452, LMG:6452, NCTC 11156, P. bivia, VPI 6822, strain 653C, strain JCVIHMP010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.