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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXO14970.1Conjugative transposon TraK protein. (207 aa)    
Predicted Functional Partners:
KXO14972.1
Conjugative transposon TraM protein; KEGG: hie:R2846_1321 0.0047 iga; Immunoglobulin A1 protease.
 
   
 0.944
KXO14969.1
Conjugative transposon TraJ protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.917
KXO14973.1
Conjugative transposon TraN protein.
 
   
 0.911
KXO14967.1
Conjugation system ATPase, TraG family; Psort location: Cytoplasmic, score: 9.12.
 
  
 0.898
KXO14968.1
Conjugative transposon protein TraI.
 
     0.889
KXO14965.1
Conjugative transposon protein TraE; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.878
KXO14966.1
Conjugative transposon protein TraF; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.876
KXO15503.1
Conjugation system ATPase, TraG family; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.826
KXO17767.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.825
KXO14971.1
Hypothetical protein.
       0.794
Your Current Organism:
Prevotella bivia
NCBI taxonomy Id: 28125
Other names: ATCC 29303, Bacteroides bivius, CCUG 9557, CIP 105105, DSM 20514, JCM 6331, LMG 6452, LMG:6452, NCTC 11156, P. bivia, VPI 6822, strain 653C, strain JCVIHMP010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.