STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXO14618.1Hypothetical protein; Psort location: OuterMembrane, score: 9.49. (792 aa)    
Predicted Functional Partners:
KXO14619.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.839
KXO14616.1
HD domain protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.783
KXO17286.1
Hypothetical protein.
  
    0.779
KXO18037.1
Hypothetical protein.
  
    0.777
KXO18088.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
     0.773
KXO17349.1
Hypothetical protein.
  
     0.773
KXO18261.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.772
KXO17971.1
Hypothetical protein; KEGG: tbe:Trebr_0412 0.0087 type I restriction-modification system, M subunit; K03427 type I restriction enzyme M protein.
  
     0.772
KXO17855.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.772
KXO17410.1
BNR/Asp-box repeat protein; KEGG: mmw:Mmwyl1_1672 3.9e-05 beta strand repeat-containing protein; Psort location: CytoplasmicMembrane, score: 9.86.
  
     0.771
Your Current Organism:
Prevotella bivia
NCBI taxonomy Id: 28125
Other names: ATCC 29303, Bacteroides bivius, CCUG 9557, CIP 105105, DSM 20514, JCM 6331, LMG 6452, LMG:6452, NCTC 11156, P. bivia, VPI 6822, strain 653C, strain JCVIHMP010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.