Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXO14674.1Transposase-like protein; KEGG: cnc:CNE_2c19700 5.6e-09 DNA (cytosine-5-)-methyltransferase K07491; Psort location: Cytoplasmic, score: 8.96. (103 aa)    
Predicted Functional Partners:
KXO14675.1
KEGG: cyc:PCC7424_4512 1.7e-48 transposase, IS605 OrfB family K07496; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.886
KXO18255.1
KEGG: cyp:PCC8801_0153 6.5e-86 transposase, IS605 OrfB family K07496; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.771
Your Current Organism:
Prevotella bivia
NCBI taxonomy Id: 28125
Other names: ATCC 29303, Bacteroides bivius, CCUG 9557, CIP 105105, DSM 20514, JCM 6331, LMG 6452, LMG:6452, NCTC 11156, P. bivia, VPI 6822, strain 653C, strain JCVIHMP010
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