Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXO14400.1Hypothetical protein; KEGG: hip:CGSHiEE_05910 2.9e-67 phosphoenolpyruvate carboxylase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the UPF0324 family. (344 aa)    
Predicted Functional Partners:
KXO14399.1
LysR substrate binding domain protein; KEGG: pfe:PSF113_1692 6.1e-19 cysB; protein CysB K13634; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
 
     0.672
Your Current Organism:
Prevotella bivia
NCBI taxonomy Id: 28125
Other names: ATCC 29303, Bacteroides bivius, CCUG 9557, CIP 105105, DSM 20514, JCM 6331, LMG 6452, LMG:6452, NCTC 11156, P. bivia, VPI 6822, strain 653C, strain JCVIHMP010
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