STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA43655.1Outer membrane assembly lipoprotein YfiO; KEGG: cco:CCC13826_1959 0.0020 tRNA (guanine-N(1)-)-methyltransferase K05807. (274 aa)    
Predicted Functional Partners:
KXA32460.1
Outer membrane protein, OMP85 family; KEGG: apb:SAR116_0511 8.5e-13 surface antigen D15 K07277; Psort location: OuterMembrane, score: 10.00.
 
 
 0.907
KXA43656.1
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
 
 
 0.895
KXA34810.1
Outer membrane protein, OMP85 family; Psort location: OuterMembrane, score: 9.49.
 
 
 0.881
KXA43657.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.813
KXA38655.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
 
  
 0.783
KXA43700.1
Hypothetical protein.
 
 
 0.777
KXA34759.1
Outer membrane protein, OMP85 family; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.774
KXA32010.1
Hypothetical protein; KEGG: sdg:SDE12394_00435 0.00086 cytochrome d ubiquinol oxidase, subunit II; K00425 cytochrome d ubiquinol oxidase subunit I; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.762
KXA32457.1
BNR/Asp-box repeat protein; Psort location: OuterMembrane, score: 9.49.
  
 
 0.755
KXA32442.1
Signal peptidase I; KEGG: pit:PIN17_A0497 2.2e-236 signal peptidase I family protein; K03100 signal peptidase I; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.754
Your Current Organism:
Prevotella corporis
NCBI taxonomy Id: 28128
Other names: ATCC 33547, Bacteroides corporis, CIP 105107, DSM 18810, JCM 8529, NCTC 13065, P. corporis, VPI 9342, strain Lambe 532-70A
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