Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXA40890.1Polysaccharide biosynthesis protein; Psort location: CytoplasmicMembrane, score: 10.00. (511 aa)    
Predicted Functional Partners:
KXA40888.1
Hypothetical protein; KEGG: efa:EF2489 1.5e-14 MurB family protein; K00075 UDP-N-acetylmuramate dehydrogenase.
 
     0.779
KXA40889.1
Hypothetical protein; KEGG: deb:DehaBAV1_0139 2.2e-08 coenzyme F420 hydrogenase/dehydrogenase subunit beta; K00441 coenzyme F420 hydrogenase beta subunit.
 
     0.656
rplO
Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
    
   0.550
KXA40883.1
Hypothetical protein; KEGG: efc:EFAU004_01963 1.0e-06 Acyltransferase family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.457
KXA39924.1
KEGG: pit:PIN17_A1294 9.2e-174 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134; Psort location: Cytoplasmic, score: 9.97.
   
  
 0.408
KXA40880.1
Glycosyltransferase, group 2 family protein; KEGG: llk:LLKF_0210 6.6e-61 ycbI; family 2 glycosyltransferase; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.402
KXA40882.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.402
KXA31233.1
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
   
    0.401
Your Current Organism:
Prevotella corporis
NCBI taxonomy Id: 28128
Other names: ATCC 33547, Bacteroides corporis, CIP 105107, DSM 18810, JCM 8529, NCTC 13065, P. corporis, VPI 9342, strain Lambe 532-70A
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