Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXA38503.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (146 aa)    
Predicted Functional Partners:
KXA38502.1
Hypothetical protein.
       0.804
KXA38504.1
UDP-glucose 4-epimerase; KEGG: pit:PIN17_A1184 4.9e-168 galE; UDP-glucose 4-epimerase K01784; Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.636
KXA38501.1
5'-nucleotidase protein; KEGG: pmz:HMPREF0659_A5589 2.2e-227 5'-nucleotidase, C-terminal domain protein; K01119 2',3'-cyclic-nucleotide 2'-phosphodiesterase; Psort location: Periplasmic, score: 9.76; Belongs to the 5'-nucleotidase family.
       0.541
KXA38500.1
Putative NAD(+) diphosphatase; KEGG: pmz:HMPREF0659_A5588 4.4e-103 hydrolase, NUDIX family; K03426 NAD+ diphosphatase; Psort location: Cytoplasmic, score: 8.96.
       0.447
Your Current Organism:
Prevotella corporis
NCBI taxonomy Id: 28128
Other names: ATCC 33547, Bacteroides corporis, CIP 105107, DSM 18810, JCM 8529, NCTC 13065, P. corporis, VPI 9342, strain Lambe 532-70A
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