Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXA37149.1TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.49. (1064 aa)    
Predicted Functional Partners:
KXA39513.1
SusD family protein.
 
 
   0.961
KXA37150.1
SusD family protein.
 
    0.928
KXA39405.1
SusD family protein.
 
     0.736
KXA32601.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
  
  0.705
KXA32594.1
Hypothetical protein; KEGG: pto:PTO0786 0.0012 oligosaccharyl transferase STT3 subunit; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase; Psort location: OuterMembrane, score: 9.49.
  
  
  0.668
KXA36184.1
Hypothetical protein; KEGG: suj:SAA6159_01731 0.0084 hyaluronate lyase 2; K01727 hyaluronate lyase; Psort location: OuterMembrane, score: 9.52.
  
     0.639
KXA39562.1
Peptidase, M56 family; KEGG: ccm:Ccan_20200 9.8e-24 putative Nucleoside-triphosphatase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 
 0.611
KXA36050.1
Hypothetical protein.
  
  
  0.600
KXA36813.1
Hypothetical protein.
  
     0.590
KXA40362.1
Hypothetical protein.
    
   0.588
Your Current Organism:
Prevotella corporis
NCBI taxonomy Id: 28128
Other names: ATCC 33547, Bacteroides corporis, CIP 105107, DSM 18810, JCM 8529, NCTC 13065, P. corporis, VPI 9342, strain Lambe 532-70A
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