STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA36195.1Site-specific recombinase, phage integrase family; KEGG: pfe:PSF113_1062 3.6e-08 xerD; XerD protein K04763; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. (372 aa)    
Predicted Functional Partners:
KXA36196.1
DNA binding domain, excisionase family; Psort location: Cytoplasmic, score: 8.96.
 
     0.916
KXA36193.1
DNA binding domain, excisionase family.
 
     0.838
KXA36192.1
Hypothetical protein; KEGG: tme:Tmel_0023 0.0097 DNA repair protein RadA K04485.
 
     0.816
KXA36191.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.805
KXA36189.1
Beta-lactamase; KEGG: bth:BT_4507 3.8e-49 beta-lactamase; K01467 beta-lactamase; Psort location: Periplasmic, score: 9.23.
  
     0.679
xerC-2
Putative tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
  
     0.668
KXA36194.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.486
KXA40673.1
Bacterial mobilization protein MobC.
  
     0.403
Your Current Organism:
Prevotella corporis
NCBI taxonomy Id: 28128
Other names: ATCC 33547, Bacteroides corporis, CIP 105107, DSM 18810, JCM 8529, NCTC 13065, P. corporis, VPI 9342, strain Lambe 532-70A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.