Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXA35377.1Permease, YjgP/YjgQ family; KEGG: hiq:CGSHiGG_02270 1.1e-05 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K07091; Psort location: CytoplasmicMembrane, score: 10.00. (644 aa)    
Predicted Functional Partners:
KXA33439.1
KEGG: pit:PIN17_A0085 9.7e-131 ABC transporter ATP-binding protein; K06861 lipopolysaccharide export system ATP-binding protein; Psort location: Cytoplasmic, score: 9.12.
 
 
 0.980
KXA40855.1
Permease, YjgP/YjgQ family; KEGG: hip:CGSHiEE_03515 2.8e-07 leucyl aminopeptidase K11720; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.977
KXA38655.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
 
 
 0.838
KXA32010.1
Hypothetical protein; KEGG: sdg:SDE12394_00435 0.00086 cytochrome d ubiquinol oxidase, subunit II; K00425 cytochrome d ubiquinol oxidase subunit I; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.745
KXA32460.1
Outer membrane protein, OMP85 family; KEGG: apb:SAR116_0511 8.5e-13 surface antigen D15 K07277; Psort location: OuterMembrane, score: 10.00.
  
     0.724
KXA43655.1
Outer membrane assembly lipoprotein YfiO; KEGG: cco:CCC13826_1959 0.0020 tRNA (guanine-N(1)-)-methyltransferase K05807.
  
   
 0.668
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.667
KXA32485.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.662
KXA34810.1
Outer membrane protein, OMP85 family; Psort location: OuterMembrane, score: 9.49.
  
     0.618
KXA35376.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.616
Your Current Organism:
Prevotella corporis
NCBI taxonomy Id: 28128
Other names: ATCC 33547, Bacteroides corporis, CIP 105107, DSM 18810, JCM 8529, NCTC 13065, P. corporis, VPI 9342, strain Lambe 532-70A
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