Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXA33538.1Hypothetical protein. (57 aa)    
Predicted Functional Partners:
KXA33536.1
Transcriptional regulator, AraC family; KEGG: cnc:CNE_2c22550 4.4e-06 pobA; P-hydroxybenzoate hydroxylase PobA; Psort location: Cytoplasmic, score: 9.26.
       0.773
KXA33537.1
Hypothetical protein.
       0.773
KXA33539.1
Hypothetical protein.
       0.468
KXA33540.1
Rubredoxin; KEGG: cpr:CPR_0938 5.1e-54 periplasmic [Fe] hydrogenase 1 K00532; Psort location: Cytoplasmic, score: 8.96.
       0.401
KXA33541.1
50S ribosomal protein L17 domain protein.
       0.401
Your Current Organism:
Prevotella corporis
NCBI taxonomy Id: 28128
Other names: ATCC 33547, Bacteroides corporis, CIP 105107, DSM 18810, JCM 8529, NCTC 13065, P. corporis, VPI 9342, strain Lambe 532-70A
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