Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXA31267.1Conjugative transposon protein TraF; Psort location: CytoplasmicMembrane, score: 9.82. (110 aa)    
Predicted Functional Partners:
KXA31266.1
Conjugative transposon protein TraE; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.945
KXA31270.1
Conjugative transposon protein TraI; KEGG: dte:Dester_1111 0.0054 nicotinate-nucleotide pyrophosphorylase K00767.
 
     0.914
KXA31272.1
Conjugative transposon TraK protein.
 
     0.874
KXA31274.1
Conjugative transposon TraM protein; KEGG: dme:Dmel_CG8545 0.00094 CG8545 gene product from transcript CG8545-RA; K14835 ribosomal RNA methyltransferase Nop2.
 
     0.871
KXA31271.1
Conjugative transposon TraJ protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.863
KXA31268.1
Conjugation system ATPase, TraG family; Psort location: Cytoplasmic, score: 9.12.
 
     0.862
KXA31275.1
Conjugative transposon TraN protein.
 
     0.859
KXA31278.1
Conjugative transposon protein TraQ family protein.
 
     0.823
KXA44699.1
Conjugative transposon protein TraE; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.784
KXA42035.1
Conjugative transposon protein TraE; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.783
Your Current Organism:
Prevotella corporis
NCBI taxonomy Id: 28128
Other names: ATCC 33547, Bacteroides corporis, CIP 105107, DSM 18810, JCM 8529, NCTC 13065, P. corporis, VPI 9342, strain Lambe 532-70A
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