STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APW33635.1Glutamine cyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)    
Predicted Functional Partners:
APW33636.1
Fused gamma-glutamyl-gamma-aminobutyrate hydrolase/peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.856
APW33637.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.746
APW33634.1
Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.642
APW33851.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.615
APW33549.1
S26 family signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.554
APW34611.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.469
APW33763.1
DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
APW33638.1
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.429
APW33713.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.423
mutS2
Endonuclease MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
  
     0.403
Your Current Organism:
Prevotella intermedia
NCBI taxonomy Id: 28131
Other names: ATCC 25611, Bacteroides intermedius, Bacteroides melaninogenicus subsp. intermedius, CCUG 24041, CIP 101222, CIP 103682, DSM 20706, JCM 11150, JCM 12248, NCTC 13070, P. intermedia, VPI 4197, strain Finegold B422
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.