Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APW33636.1Fused gamma-glutamyl-gamma-aminobutyrate hydrolase/peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (622 aa)    
Predicted Functional Partners:
APW33635.1
Glutamine cyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.853
APW33637.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.714
APW33634.1
Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.625
APW33626.1
AhpC/TSA family antioxidant; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.468
APW33639.1
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.466
APW33638.1
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.460
APW35118.1
Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.449
porW
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.426
APW33938.1
Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.416
NifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.409
Your Current Organism:
Prevotella intermedia
NCBI taxonomy Id: 28131
Other names: ATCC 25611, Bacteroides intermedius, Bacteroides melaninogenicus subsp. intermedius, CCUG 24041, CIP 101222, CIP 103682, DSM 20706, JCM 11150, JCM 12248, NCTC 13070, P. intermedia, VPI 4197, strain Finegold B422
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