STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APW34609.1T9SS C-terminal target domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)    
Predicted Functional Partners:
APW35106.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.822
sov
Cell surface protein SprA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.806
porV-2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.800
porW
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.777
porP
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
APW35086.1
DUF5103 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
APW35179.1
DUF4835 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
porT
PorT family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
APW33713.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.768
porU
Por secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.761
Your Current Organism:
Prevotella intermedia
NCBI taxonomy Id: 28131
Other names: ATCC 25611, Bacteroides intermedius, Bacteroides melaninogenicus subsp. intermedius, CCUG 24041, CIP 101222, CIP 103682, DSM 20706, JCM 11150, JCM 12248, NCTC 13070, P. intermedia, VPI 4197, strain Finegold B422
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.