STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APW34863.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (96 aa)    
Predicted Functional Partners:
APW34862.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.793
APW34864.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.793
APW34865.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.786
APW34866.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.661
APW34867.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.661
APW34868.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.631
APW34869.1
Phage morphogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.631
APW34870.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.631
APW34858.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.483
APW34859.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.463
Your Current Organism:
Prevotella intermedia
NCBI taxonomy Id: 28131
Other names: ATCC 25611, Bacteroides intermedius, Bacteroides melaninogenicus subsp. intermedius, CCUG 24041, CIP 101222, CIP 103682, DSM 20706, JCM 11150, JCM 12248, NCTC 13070, P. intermedia, VPI 4197, strain Finegold B422
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.