STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APW35163.1Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)    
Predicted Functional Partners:
APW35165.1
Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.856
APW35164.1
Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
APW35162.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.728
APW33893.1
Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.723
APW34172.1
Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.722
APW33995.1
Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.715
APW35602.1
Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.711
APW34800.1
Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.706
traP
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.671
BWX40_02420
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.524
Your Current Organism:
Prevotella intermedia
NCBI taxonomy Id: 28131
Other names: ATCC 25611, Bacteroides intermedius, Bacteroides melaninogenicus subsp. intermedius, CCUG 24041, CIP 101222, CIP 103682, DSM 20706, JCM 11150, JCM 12248, NCTC 13070, P. intermedia, VPI 4197, strain Finegold B422
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.