STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APW35524.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)    
Predicted Functional Partners:
APW35525.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
0.971
APW35526.1
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.939
APW34014.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.765
APW34015.1
Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
APW34016.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.755
APW34013.1
HlyD family secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.745
APW35528.1
DUF4492 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.568
APW35527.1
Alkaline protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.545
APW35529.1
Cytochrome ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome ubiquinol oxidase subunit 1 family.
       0.428
APW35530.1
Cytochrome C oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.425
Your Current Organism:
Prevotella intermedia
NCBI taxonomy Id: 28131
Other names: ATCC 25611, Bacteroides intermedius, Bacteroides melaninogenicus subsp. intermedius, CCUG 24041, CIP 101222, CIP 103682, DSM 20706, JCM 11150, JCM 12248, NCTC 13070, P. intermedia, VPI 4197, strain Finegold B422
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.