STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF83912.1MvaI/BcnI restriction endonuclease family protein. (275 aa)    
Predicted Functional Partners:
SHF83942.1
Modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.939
typA
GTP-binding protein.
       0.768
SHF76863.1
Adenine-specific DNA-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.644
SHF76828.1
Adenine-specific DNA-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.642
rsrIM
Site-specific DNA-methyltransferase (adenine-specific); Manually curated; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.581
rpsO
Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
       0.524
Your Current Organism:
Prevotella oralis
NCBI taxonomy Id: 28134
Other names: ATCC 33269, Bacteroides oralis, CCUG 15408, DSM 20702, JCM 12251, NCTC 11459, P. oralis, Ristella oralis, VPI D27B-24
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