STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ65192.1Protein of unknown function. (561 aa)    
Predicted Functional Partners:
SJZ65170.1
Starch-binding associating with outer membrane.
       0.756
SJZ65151.1
TonB-linked outer membrane protein, SusC/RagA family.
       0.712
SJZ65206.1
Glycosyl hydrolase-like 10.
  
    0.707
SJZ65226.1
Calcineurin-like phosphoesterase.
       0.563
Your Current Organism:
Prevotella oulorum
NCBI taxonomy Id: 28136
Other names: ATCC 43324, Bacteroides oulorum, CCUG 54769, CIP 104477, JCM 14966, NCTC 11871, P. oulorum, Prevotella oulora, strain WPH 179
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.