STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA09331.1Histidine phosphatase superfamily (branch 2). (457 aa)    
Predicted Functional Partners:
SJZ84493.1
Plasmid recombination enzyme.
  
     0.613
SJZ92109.1
Outer membrane protein beta-barrel family protein.
  
     0.580
SJZ97209.1
Outer membrane protein beta-barrel family protein.
  
     0.573
SJZ93139.1
Nucleotidyl transferase AbiEii toxin, Type IV TA system.
  
     0.531
SKA09317.1
Phosphoglycerol transferase MdoB.
       0.526
SKA09301.1
Hypothetical protein.
       0.512
SJZ69755.1
Imelysin.
  
     0.494
SJZ97076.1
DNA-binding protein, histone-like, putative.
  
     0.493
SJZ92851.1
Hypothetical protein.
  
     0.492
SJZ46648.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
     0.481
Your Current Organism:
Prevotella oulorum
NCBI taxonomy Id: 28136
Other names: ATCC 43324, Bacteroides oulorum, CCUG 54769, CIP 104477, JCM 14966, NCTC 11871, P. oulorum, Prevotella oulora, strain WPH 179
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