STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA18102.1Hypothetical protein. (151 aa)    
Predicted Functional Partners:
SKA18117.1
Hypothetical protein.
      0.532
SKA21996.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
     0.450
SKA13803.1
ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
   
 0.447
SJZ53768.1
heptose-I-phosphate ethanolaminephosphotransferase.
  
     0.442
SKA08804.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
     0.433
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.413
Your Current Organism:
Prevotella oulorum
NCBI taxonomy Id: 28136
Other names: ATCC 43324, Bacteroides oulorum, CCUG 54769, CIP 104477, JCM 14966, NCTC 11871, P. oulorum, Prevotella oulora, strain WPH 179
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.