STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB31531.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)    
Predicted Functional Partners:
KXB31530.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.717
KXB31529.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.645
KXB31527.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.632
KXB31580.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.629
KXB31528.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.626
KXB31526.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.561
msbA
Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
     
 0.555
KXB28932.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.521
KXB31579.1
Heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.503
KXB31524.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.490
Your Current Organism:
Dechloromonas denitrificans
NCBI taxonomy Id: 281362
Other names: ATCC BAA-841, D. denitrificans, DSM 15892, Dechloromonas denitrificans Horn et al. 2005, strain ED1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.