STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB29549.1Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)    
Predicted Functional Partners:
KXB32442.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 0.982
KXB32445.1
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.975
KXB31811.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.974
napA
Nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
 
 0.959
napA-2
Nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
 
 0.957
KXB29923.1
Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the rubredoxin family.
 
 0.939
KXB31339.1
MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.938
KXB29747.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.936
KXB29803.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.936
KXB29551.1
(Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.923
Your Current Organism:
Dechloromonas denitrificans
NCBI taxonomy Id: 281362
Other names: ATCC BAA-841, D. denitrificans, DSM 15892, Dechloromonas denitrificans Horn et al. 2005, strain ED1
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