STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB29864.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (68 aa)    
Predicted Functional Partners:
KXB29826.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 0.980
KXB29862.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.939
KXB31928.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.816
KXB32517.1
Copper-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.808
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
       0.790
KXB29863.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.780
KXB30523.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.779
KXB32609.1
Copper-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.762
KXB31730.1
4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.749
KXB29866.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.737
Your Current Organism:
Dechloromonas denitrificans
NCBI taxonomy Id: 281362
Other names: ATCC BAA-841, D. denitrificans, DSM 15892, Dechloromonas denitrificans Horn et al. 2005, strain ED1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.