node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXB29027.1 | KXB29029.1 | AT959_19595 | AT959_19605 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family. | 0.491 |
KXB29027.1 | KXB29030.1 | AT959_19595 | AT959_19610 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.418 |
KXB29027.1 | rdgC | AT959_19595 | AT959_19600 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family. | 0.491 |
KXB29029.1 | KXB29027.1 | AT959_19605 | AT959_19595 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.491 |
KXB29029.1 | KXB29030.1 | AT959_19605 | AT959_19610 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.642 |
KXB29029.1 | KXB29648.1 | AT959_19605 | AT959_17095 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family. | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.406 |
KXB29029.1 | KXB32328.1 | AT959_19605 | AT959_01095 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family. | Osmotically inducible protein OsmC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
KXB29029.1 | ffh | AT959_19605 | AT959_05005 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family. | Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components; Belo [...] | 0.493 |
KXB29029.1 | rdgC | AT959_19605 | AT959_19600 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family. | Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family. | 0.773 |
KXB29029.1 | secY | AT959_19605 | AT959_01960 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.570 |
KXB29029.1 | yidC | AT959_19605 | AT959_16860 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family. | Insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.568 |
KXB29030.1 | KXB29027.1 | AT959_19610 | AT959_19595 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.418 |
KXB29030.1 | KXB29029.1 | AT959_19610 | AT959_19605 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family. | 0.642 |
KXB29030.1 | rdgC | AT959_19610 | AT959_19600 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family. | 0.649 |
KXB29648.1 | KXB29029.1 | AT959_17095 | AT959_19605 | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family. | 0.406 |
KXB32328.1 | KXB29029.1 | AT959_01095 | AT959_19605 | Osmotically inducible protein OsmC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family. | 0.561 |
ffh | KXB29029.1 | AT959_05005 | AT959_19605 | Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components; Belo [...] | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family. | 0.493 |
ffh | secY | AT959_05005 | AT959_01960 | Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components; Belo [...] | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.990 |
ffh | yidC | AT959_05005 | AT959_16860 | Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components; Belo [...] | Insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.944 |
rdgC | KXB29027.1 | AT959_19600 | AT959_19595 | Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.491 |