STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB29042.1Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (387 aa)    
Predicted Functional Partners:
KXB29043.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.993
KXB30378.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.971
KXB29145.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.942
KXB30377.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.933
KXB29086.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.919
KXB29279.1
Channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.880
KXB30791.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.850
KXB29602.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.845
KXB29071.1
Multidrug transporter AcrB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.787
KXB30062.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.741
Your Current Organism:
Dechloromonas denitrificans
NCBI taxonomy Id: 281362
Other names: ATCC BAA-841, D. denitrificans, DSM 15892, Dechloromonas denitrificans Horn et al. 2005, strain ED1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.