STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKE94063.1YodA lipocalin-like domain-containing protein. (212 aa)    
Predicted Functional Partners:
AKE95645.1
High-affinity zinc transporter periplasmic protein.
 
  
 0.975
rpmE2
50S ribosomal protein L31.
  
  
 0.875
znuC
High-affinity zinc transporter ATPase; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
  
 0.843
AKE95643.1
High-affinity zinc uptake system membrane protein.
  
  
 0.803
AKE94062.1
2-ketogluconate utilization repressor.
       0.492
AKE94551.1
GTP-binding protein.
  
  
 0.485
AKE95348.1
Cobalamin synthesis protein P47K.
  
  
 0.485
rpmE
50S ribosomal protein L31; Binds the 23S rRNA.
  
  
 0.477
AKE95926.1
Hypothetical protein.
  
     0.459
AKE93262.1
NadR transcriptional regulator.
  
     0.437
Your Current Organism:
Cronobacter sakazakii
NCBI taxonomy Id: 28141
Other names: ATCC 29544, C. sakazakii, CCUG 14558, CDC 4562-70 (78-067947), CIP 103183, Cronobacter sakazakii subsp. sakazakii, DSM 4485, Enterobacter sakazakii, LMG 5740, LMG:5740, NBRC 102416, NCTC 11467, yellow -pigmented Enterobacter cloacae
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