Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKE93081.1 | AKE94193.1 | CSK29544_00116 | CSK29544_01232 | Bifunctional glycosyl transferase/transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein 1A. | 0.952 |
| AKE93081.1 | AKE94906.1 | CSK29544_00116 | CSK29544_01948 | Bifunctional glycosyl transferase/transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein 1C. | 0.912 |
| AKE93081.1 | ftsI | CSK29544_00116 | CSK29544_00186 | Bifunctional glycosyl transferase/transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Cell division protein FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | 0.798 |
| AKE93081.1 | mrdA | CSK29544_00116 | CSK29544_03979 | Bifunctional glycosyl transferase/transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein II; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.794 |
| AKE93081.1 | mrdB | CSK29544_00116 | CSK29544_03980 | Bifunctional glycosyl transferase/transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Cell wall shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.700 |
| AKE94193.1 | AKE93081.1 | CSK29544_01232 | CSK29544_00116 | Penicillin-binding protein 1A. | Bifunctional glycosyl transferase/transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.952 |
| AKE94193.1 | AKE94906.1 | CSK29544_01232 | CSK29544_01948 | Penicillin-binding protein 1A. | Penicillin-binding protein 1C. | 0.924 |
| AKE94193.1 | AKE95482.1 | CSK29544_01232 | CSK29544_02525 | Penicillin-binding protein 1A. | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.911 |
| AKE94193.1 | AKE96750.1 | CSK29544_01232 | CSK29544_03805 | Penicillin-binding protein 1A. | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.912 |
| AKE94193.1 | AKE96927.1 | CSK29544_01232 | CSK29544_03982 | Penicillin-binding protein 1A. | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.916 |
| AKE94193.1 | ftsI | CSK29544_01232 | CSK29544_00186 | Penicillin-binding protein 1A. | Cell division protein FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | 0.787 |
| AKE94193.1 | lpoA | CSK29544_01232 | CSK29544_00518 | Penicillin-binding protein 1A. | Putative lipoprotein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family. | 0.761 |
| AKE94193.1 | mrdA | CSK29544_01232 | CSK29544_03979 | Penicillin-binding protein 1A. | Penicillin-binding protein II; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.813 |
| AKE94193.1 | mrdB | CSK29544_01232 | CSK29544_03980 | Penicillin-binding protein 1A. | Cell wall shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.819 |
| AKE94193.1 | mtgA | CSK29544_01232 | CSK29544_00576 | Penicillin-binding protein 1A. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.729 |
| AKE94906.1 | AKE93081.1 | CSK29544_01948 | CSK29544_00116 | Penicillin-binding protein 1C. | Bifunctional glycosyl transferase/transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.912 |
| AKE94906.1 | AKE94193.1 | CSK29544_01948 | CSK29544_01232 | Penicillin-binding protein 1C. | Penicillin-binding protein 1A. | 0.924 |
| AKE94906.1 | AKE95482.1 | CSK29544_01948 | CSK29544_02525 | Penicillin-binding protein 1C. | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.562 |
| AKE94906.1 | AKE96750.1 | CSK29544_01948 | CSK29544_03805 | Penicillin-binding protein 1C. | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.527 |
| AKE94906.1 | AKE96927.1 | CSK29544_01948 | CSK29544_03982 | Penicillin-binding protein 1C. | D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.546 |
page 1 of 4