STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKE94312.1Nucleotidyltransferase. (261 aa)    
Predicted Functional Partners:
AKE94310.1
Hypothetical protein.
 
  
 0.945
AKE94311.1
RNA ligase.
 
    0.945
AKE94308.1
Transcriptional regulator.
 
   
 0.757
AKE97116.1
Hypothetical protein.
  
     0.647
AKE95630.1
DnaJ domain-containing protein.
  
     0.617
AKE93236.1
Inner membrane protein CreD.
  
     0.550
AKE94309.1
Hypothetical protein.
       0.510
AKE97115.1
Hypothetical protein.
  
     0.491
AKE95701.1
Hypothetical protein.
  
     0.486
wzx
Hypothetical protein.
      
 0.465
Your Current Organism:
Cronobacter sakazakii
NCBI taxonomy Id: 28141
Other names: ATCC 29544, C. sakazakii, CCUG 14558, CDC 4562-70 (78-067947), CIP 103183, Cronobacter sakazakii subsp. sakazakii, DSM 4485, Enterobacter sakazakii, LMG 5740, LMG:5740, NBRC 102416, NCTC 11467, yellow -pigmented Enterobacter cloacae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.