STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKE94458.1Fimbrial protein. (177 aa)    
Predicted Functional Partners:
AKE94460.1
Fimbrial assembly protein.
  
 
 0.716
AKE94461.1
Perplasmic fimbrial chaperone.
  
   0.711
AKE94459.1
Fimbrial protein.
       0.568
AKE93728.1
P pilus assembly protein, chaperone.
  
   0.562
CSK29544_03656
Uncharacterized protein; Fimbrial biogenesis outer membrane usher protein.
  
   0.562
AKE96786.1
Hypothetical protein.
  
   0.562
AKE97026.1
Fimbrial chaperone protein.
  
   0.562
AKE93727.1
Pilus assembly protein.
  
 
 0.525
AKE97025.1
Fimbrial usher family protein.
  
 
 0.525
AKE93964.1
Fimbrial assembly protein.
  
 
 0.516
Your Current Organism:
Cronobacter sakazakii
NCBI taxonomy Id: 28141
Other names: ATCC 29544, C. sakazakii, CCUG 14558, CDC 4562-70 (78-067947), CIP 103183, Cronobacter sakazakii subsp. sakazakii, DSM 4485, Enterobacter sakazakii, LMG 5740, LMG:5740, NBRC 102416, NCTC 11467, yellow -pigmented Enterobacter cloacae
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