Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKE94944.1 | AKE94946.1 | CSK29544_01986 | CSK29544_01988 | Hypothetical protein. | Hypothetical protein; Belongs to the ArsC family. | 0.717 |
AKE94944.1 | AKE94947.1 | CSK29544_01986 | CSK29544_01989 | Hypothetical protein. | Hypothetical protein. | 0.474 |
AKE94944.1 | dapE | CSK29544_01986 | CSK29544_01987 | Hypothetical protein. | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.695 |
AKE94946.1 | AKE94944.1 | CSK29544_01988 | CSK29544_01986 | Hypothetical protein; Belongs to the ArsC family. | Hypothetical protein. | 0.717 |
AKE94946.1 | AKE94947.1 | CSK29544_01988 | CSK29544_01989 | Hypothetical protein; Belongs to the ArsC family. | Hypothetical protein. | 0.529 |
AKE94946.1 | dapE | CSK29544_01988 | CSK29544_01987 | Hypothetical protein; Belongs to the ArsC family. | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.940 |
AKE94947.1 | AKE94944.1 | CSK29544_01989 | CSK29544_01986 | Hypothetical protein. | Hypothetical protein. | 0.474 |
AKE94947.1 | AKE94946.1 | CSK29544_01989 | CSK29544_01988 | Hypothetical protein. | Hypothetical protein; Belongs to the ArsC family. | 0.529 |
AKE94947.1 | AKE94949.1 | CSK29544_01989 | CSK29544_01991 | Hypothetical protein. | Hypothetical protein. | 0.518 |
AKE94947.1 | AKE94950.1 | CSK29544_01989 | CSK29544_01992 | Hypothetical protein. | Hypothetical protein. | 0.893 |
AKE94947.1 | dapE | CSK29544_01989 | CSK29544_01987 | Hypothetical protein. | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.534 |
AKE94949.1 | AKE94947.1 | CSK29544_01991 | CSK29544_01989 | Hypothetical protein. | Hypothetical protein. | 0.518 |
AKE94950.1 | AKE94947.1 | CSK29544_01992 | CSK29544_01989 | Hypothetical protein. | Hypothetical protein. | 0.893 |
dapE | AKE94944.1 | CSK29544_01987 | CSK29544_01986 | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | Hypothetical protein. | 0.695 |
dapE | AKE94946.1 | CSK29544_01987 | CSK29544_01988 | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | Hypothetical protein; Belongs to the ArsC family. | 0.940 |
dapE | AKE94947.1 | CSK29544_01987 | CSK29544_01989 | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | Hypothetical protein. | 0.534 |