Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKE95368.1Galactose ABC transporter periplasmic galactose-binding protein. (332 aa)    
Predicted Functional Partners:
AKE95369.1
Galactose ABC transporter, ATP-binding protein.
 
 0.991
AKE95370.1
Beta-methylgalactoside transporter inner membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.989
AKE95922.1
Methyl-accepting chemotaxis protein III.
     
 0.900
AKE96139.1
Hypothetical protein.
     
 0.900
AKE96430.1
Methyl-accepting chemotaxis protein III.
     
 0.900
AKE94725.1
Hybrid sensory histidine kinase BarA.
   
 
 0.882
AKE93920.1
Ribose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.813
AKE93542.1
Aerobic respiration control sensor protein ArcB.
   
 
 0.808
AKE96063.1
Hypothetical protein.
   
 
 0.808
araH
L-arabinose ABC transporter, permease protein AraH; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.806
Your Current Organism:
Cronobacter sakazakii
NCBI taxonomy Id: 28141
Other names: ATCC 29544, C. sakazakii, CCUG 14558, CDC 4562-70 (78-067947), CIP 103183, Cronobacter sakazakii subsp. sakazakii, DSM 4485, Enterobacter sakazakii, LMG 5740, LMG:5740, NBRC 102416, NCTC 11467, yellow -pigmented Enterobacter cloacae
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