STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKE95515.1GGDEF domain-containing protein. (525 aa)    
Predicted Functional Partners:
AKE96063.1
Hypothetical protein.
 
 0.979
AKE94725.1
Hybrid sensory histidine kinase BarA.
 
 0.972
AKE93542.1
Aerobic respiration control sensor protein ArcB.
 
 0.970
AKE95427.1
Putative seonsory protein.
 
 
0.854
AKE95877.1
Hypothetical protein.
 
 0.854
AKE94089.1
Biofilm formation regulator HmsP.
 
 0.852
AKE95010.1
EAL domain-containing protein.
 
 0.847
rcsC
Sensor protein RcsC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.
 
 0.846
AKE94925.1
Hypothetical protein.
 
 0.845
AKE97049.1
Hypothetical protein.
 
     0.830
Your Current Organism:
Cronobacter sakazakii
NCBI taxonomy Id: 28141
Other names: ATCC 29544, C. sakazakii, CCUG 14558, CDC 4562-70 (78-067947), CIP 103183, Cronobacter sakazakii subsp. sakazakii, DSM 4485, Enterobacter sakazakii, LMG 5740, LMG:5740, NBRC 102416, NCTC 11467, yellow -pigmented Enterobacter cloacae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.