STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKE95843.1Antimicrobial peptide ABC system ATP-binding protein SapD; Belongs to the ABC transporter superfamily. (330 aa)    
Predicted Functional Partners:
AKE95845.1
Antimicrobial peptide ABC transporter permease SapB.
 
 0.996
AKE95844.1
Antimicrobial peptide ABC transporter permease SapC.
  
 0.993
AKE94075.1
Dipeptide transport system permease protein.
 
   
 0.978
AKE96122.1
Binding-protein-dependent transport system inner membrane component.
 
   
 0.977
AKE96754.1
Glutathione ABC transporter permease GsiD.
 
   
 0.974
AKE96174.1
Hypothetical protein.
 
   
 0.973
AKE95792.1
Oligopeptide ABC transport system permease protein OppC.
 
   
 0.967
AKE95842.1
Antimicrobial peptide ABC system ATP-binding protein SapF.
 
  
0.947
AKE95846.1
Antimicrobial peptide ABC transporter substrate-binding protein SapA.
  
 0.920
artP
Glutamate/aspartate transport ATP-binding protein GltL.
 
     
0.898
Your Current Organism:
Cronobacter sakazakii
NCBI taxonomy Id: 28141
Other names: ATCC 29544, C. sakazakii, CCUG 14558, CDC 4562-70 (78-067947), CIP 103183, Cronobacter sakazakii subsp. sakazakii, DSM 4485, Enterobacter sakazakii, LMG 5740, LMG:5740, NBRC 102416, NCTC 11467, yellow -pigmented Enterobacter cloacae
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