STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKE95909.1Putative acetyltransferase. (162 aa)    
Predicted Functional Partners:
AKE96058.1
Hypothetical protein.
      0.863
AKE95910.1
Glutathione transferase FosA.
       0.787
AKE96049.1
GCN5 family acetyltransferase.
  
     0.765
AKE95907.1
Major facilitator transporter.
       0.501
AKE95908.1
MarR family transcriptional regulator.
       0.501
AKE95911.1
Hypothetical protein.
       0.486
AKE95905.1
RND efflux system outer membrane lipoprotein.
       0.433
AKE95906.1
Secretion protein, HlyD family.
       0.433
Your Current Organism:
Cronobacter sakazakii
NCBI taxonomy Id: 28141
Other names: ATCC 29544, C. sakazakii, CCUG 14558, CDC 4562-70 (78-067947), CIP 103183, Cronobacter sakazakii subsp. sakazakii, DSM 4485, Enterobacter sakazakii, LMG 5740, LMG:5740, NBRC 102416, NCTC 11467, yellow -pigmented Enterobacter cloacae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.