Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKE95973.1Hypothetical protein. (570 aa)    
Predicted Functional Partners:
AKE95974.1
Hypothetical protein.
       0.785
AKE95972.1
Transglycosylase SLT domain-containing protein.
       0.773
AKE95975.1
Hypothetical protein.
       0.773
AKE95969.1
Hypothetical protein.
       0.757
AKE95971.1
Hypothetical protein.
       0.757
AKE95970.1
Hypothetical protein.
       0.750
AKE95968.1
Hypothetical protein.
       0.749
AKE95967.1
Hypothetical protein.
       0.746
AKE95966.1
Hypothetical protein.
       0.595
AKE95965.1
Hypothetical protein.
       0.583
Your Current Organism:
Cronobacter sakazakii
NCBI taxonomy Id: 28141
Other names: ATCC 29544, C. sakazakii, CCUG 14558, CDC 4562-70 (78-067947), CIP 103183, Cronobacter sakazakii subsp. sakazakii, DSM 4485, Enterobacter sakazakii, LMG 5740, LMG:5740, NBRC 102416, NCTC 11467, yellow -pigmented Enterobacter cloacae
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