STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKE96302.1Hydrogenase III maturation protease. (157 aa)    
Predicted Functional Partners:
AKE96304.1
Formate hydrogenlyase subunit VII.
  
 0.983
AKE96303.1
Formate hydrogenlyase maturation protein HycH.
 
  
 0.979
AKE96305.1
Formate hydrogenlyase complex iron-sulfur subunit.
 
  
 0.960
AKE96306.1
Formate hydrogenlyase subunit V.
 
  
 0.934
AKE96307.1
Formate hydrogenlyase subunit IV.
 
  
 0.896
AKE96308.1
Formate hydrogenlyase subunit III.
 
  
 0.873
AKE96309.1
Formate hydrogenlyase subunit II.
  
 0.759
AKE96299.1
Electron transport protein HydN.
  
 0.688
AKE96531.1
NADH dehydrogenase.
    
 
 0.564
AKE95761.1
Hypothetical protein.
  
     0.541
Your Current Organism:
Cronobacter sakazakii
NCBI taxonomy Id: 28141
Other names: ATCC 29544, C. sakazakii, CCUG 14558, CDC 4562-70 (78-067947), CIP 103183, Cronobacter sakazakii subsp. sakazakii, DSM 4485, Enterobacter sakazakii, LMG 5740, LMG:5740, NBRC 102416, NCTC 11467, yellow -pigmented Enterobacter cloacae
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