Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKE96445.1Phage tail assembly protein. (198 aa)    
Predicted Functional Partners:
AKE96447.1
Phage minor tail protein L.
 
   0.924
AKE96448.1
Phage minor tail protein II.
  
   0.904
AKE96444.1
Phage host specificity protein.
 
   0.873
AKE96446.1
Phage minor tail protein.
  
    0.842
AKE96449.1
Phage tail length tape-measure protein.
  
   0.819
AKE95113.1
Phage host specificity protein.
 
   0.684
AKE95110.1
Phage minor tail protein L.
  
   0.656
AKE97296.1
Phage minor tail protein L.
  
   0.656
AKE96453.1
Hypothetical protein.
  
  
 0.641
AKE95292.1
Phage tail protein.
  
   0.630
Your Current Organism:
Cronobacter sakazakii
NCBI taxonomy Id: 28141
Other names: ATCC 29544, C. sakazakii, CCUG 14558, CDC 4562-70 (78-067947), CIP 103183, Cronobacter sakazakii subsp. sakazakii, DSM 4485, Enterobacter sakazakii, LMG 5740, LMG:5740, NBRC 102416, NCTC 11467, yellow -pigmented Enterobacter cloacae
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