Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKE97283.1Hypothetical protein. (51 aa)    
Predicted Functional Partners:
AKE97282.1
Hypothetical protein.
       0.773
AKE97284.1
Phage antirestriction protein.
       0.741
AKE97285.1
Phage DNA repair protein; Belongs to the UPF0758 family.
       0.702
AKE97286.1
Hypothetical protein.
       0.697
AKE97287.1
Hypothetical protein.
       0.641
AKE97288.1
Hypothetical protein.
       0.590
AKE97281.1
Hypothetical protein.
       0.559
AKE97279.1
Hypothetical protein.
       0.509
AKE97280.1
Hypothetical protein.
       0.509
AKE97278.1
DeoR-like HTH domain protein.
       0.437
Your Current Organism:
Cronobacter sakazakii
NCBI taxonomy Id: 28141
Other names: ATCC 29544, C. sakazakii, CCUG 14558, CDC 4562-70 (78-067947), CIP 103183, Cronobacter sakazakii subsp. sakazakii, DSM 4485, Enterobacter sakazakii, LMG 5740, LMG:5740, NBRC 102416, NCTC 11467, yellow -pigmented Enterobacter cloacae
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