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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yehYBinding--dependent transport system inner membrane component family protein; [E] COG1174 ABC-type proline/glycine betaine transport systems, permease component. (384 aa)    
Predicted Functional Partners:
opuCC
[M] COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
 
 0.999
proV-2
ABC transporter family protein; [E] COG1125 ABC-type proline/glycine betaine transport systems, ATPase components.
 0.998
yehW
Binding--dependent transport system inner membrane component family protein; [E] COG1174 ABC-type proline/glycine betaine transport systems, permease component.
 
  
 
0.984
CH54_1066
ABC transporter, phosphonate, periplasmic substrate-binding family protein; [P] COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
       0.697
proV
proV: glycine betaine/L-proline transport ATP binding subunit; [E] COG4175 ABC-type proline/glycine betaine transport system, ATPase component.
  
 0.665
proX
Substrate binding domain of ABC-type glycine betaine transport system family protein; [E] COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
 
  
 0.436
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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