STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoPHypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (223 aa)    
Predicted Functional Partners:
phoQ
HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.
 0.999
barA
HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.921
phoR
phoR_proteo: phosphate regulon sensor kinase PhoR; [T] COG0642 Signal transduction histidine kinase.
 
 0.906
basS_1
HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.885
arcB
Sensory box protein; [T] COG0642 Signal transduction histidine kinase.
 
 0.884
adrA_2
GGDEF: diguanylate cyclase domain protein; [T] COG2202 FOG: PAS/PAC domain.
 
 
 0.871
cpxA_2
HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.
 
 0.852
envZ
HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.844
CH54_46
Bacterial extracellular solute-binding s, 3 family protein; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
 
 0.844
rcsD
Hpt domain protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.
 
 
 0.816
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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