Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CH54_1558 | ureA | CH54_1558 | CH54_1557 | Hypothetical protein. | Urease_gam: urease, gamma subunit; [E] COG0831 Urea amidohydrolase (urease) gamma subunit; Belongs to the urease gamma subunit family. | 0.518 |
CH54_1558 | ureB | CH54_1558 | CH54_1556 | Hypothetical protein. | Urease_beta: urease, beta subunit; [E] COG0832 Urea amidohydrolase (urease) beta subunit; Belongs to the urease beta subunit family. | 0.420 |
ureA | CH54_1558 | CH54_1557 | CH54_1558 | Urease_gam: urease, gamma subunit; [E] COG0831 Urea amidohydrolase (urease) gamma subunit; Belongs to the urease gamma subunit family. | Hypothetical protein. | 0.518 |
ureA | ureB | CH54_1557 | CH54_1556 | Urease_gam: urease, gamma subunit; [E] COG0831 Urea amidohydrolase (urease) gamma subunit; Belongs to the urease gamma subunit family. | Urease_beta: urease, beta subunit; [E] COG0832 Urea amidohydrolase (urease) beta subunit; Belongs to the urease beta subunit family. | 0.999 |
ureB | CH54_1558 | CH54_1556 | CH54_1558 | Urease_beta: urease, beta subunit; [E] COG0832 Urea amidohydrolase (urease) beta subunit; Belongs to the urease beta subunit family. | Hypothetical protein. | 0.420 |
ureB | ureA | CH54_1556 | CH54_1557 | Urease_beta: urease, beta subunit; [E] COG0832 Urea amidohydrolase (urease) beta subunit; Belongs to the urease beta subunit family. | Urease_gam: urease, gamma subunit; [E] COG0831 Urea amidohydrolase (urease) gamma subunit; Belongs to the urease gamma subunit family. | 0.999 |