STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
manZ_2EIID-AGA: PTS system, mannose/fructose/sorbose, IID component family protein; [G] COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID. (287 aa)    
Predicted Functional Partners:
manY_2
EII-Sor: PTS system, mannose/fructose/sorbose, IIC component family protein; [G] COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC.
 0.999
manX
Pts-sorbose: PTS system, mannose/fructose/sorbose, IIB component family protein; [G] COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB.
 
 0.999
CH54_1650
EII-Sor: PTS system, mannose/fructose/sorbose, IIC component family protein; [G] COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC.
 
 0.995
CH54_1648
EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component domain protein; [G] COG2893 Phosphotransferase system, mannose/fructose-specific component IIA.
 
 
 0.973
CH54_1649
Pts-sorbose: PTS system, mannose/fructose/sorbose, IIB component family protein; [G] COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB.
 
 
 0.973
manA
manA: mannose-6-phosphate isomerase, class I; [G] COG1482 Phosphomannose isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
    
  0.910
hpr
PTS_HPr_: phosphocarrier, HPr family protein; [G] COG1925 Phosphotransferase system, HPr-related proteins.
    
 0.908
mak
Glucokinase family protein; [KG] COG1940 Transcriptional regulator/sugar kinase.
   
 
  0.801
yobD
Conserved hypothetical protein; [S] COG4811 Predicted membrane protein.
 
    0.723
fruA
FRU: PTS system, Fru family, IIB component domain protein; [G] COG1299 Phosphotransferase system, fructose-specific IIC component.
   
  
 0.723
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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