STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yccTConserved hypothetical protein; [S] COG3110 Uncharacterized protein conserved in bacteria; Belongs to the UPF0319 family. (227 aa)    
Predicted Functional Partners:
napD
napD family protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
  
   
 0.682
pspG
phageshock_pspG: phage shock protein G.
  
     0.649
CH54_4105
Fructosamine kinase family protein.
  
     0.647
ycgR
pilZ domain protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.
  
     0.637
CH54_1080
Suppressor of fused family protein.
  
     0.618
yhjH_1
[T] COG2200 FOG: EAL domain.
  
    0.614
yiaH
Acyltransferase family protein; Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units.
  
     0.590
bcsE
cellulose_bcsE: cellulose biosynthesis protein BcsE.
  
     0.577
CH54_2020
Hypothetical protein; Opacity-associated A N-terminal motif family protein; [M] COG3061 Cell envelope opacity-associated protein A.
  
     0.570
CH54_3599
[M] COG3765 Chain length determinant protein.
  
     0.563
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.