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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytfPAIG2-like family protein; [S] COG2105 Uncharacterized conserved protein. (120 aa)    
Predicted Functional Partners:
CH54_2009
Conserved hypothetical protein; [S] COG2911 Uncharacterized protein conserved in bacteria.
 
     0.848
CH54_2010
Surface antigen variable number repeat family protein; [M] COG0729 Outer membrane protein.
 
   
 0.847
CH54_1139
cyd_oper_ybgE: cyd operon protein YbgE; [S] COG3790 Predicted membrane protein.
  
     0.739
CH54_3069
yqjK-like family protein.
  
     0.705
CH54_731
Hypothetical protein.
  
     0.695
atpI
[C] COG3312 F0F1-type ATP synthase, subunit I.
  
     0.680
yqjE
Conserved hypothetical protein; [S] COG5393 Predicted membrane protein.
  
     0.680
CH54_3995
yejG-like family protein.
  
     0.633
CH54_660
Hypothetical protein.
  
     0.618
CH54_2020
Hypothetical protein; Opacity-associated A N-terminal motif family protein; [M] COG3061 Cell envelope opacity-associated protein A.
  
     0.613
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.