Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CH54_2473 | CH54_2474 | CH54_2473 | CH54_2474 | Hypothetical protein. | Hypothetical protein. | 0.417 |
CH54_2473 | glyQ | CH54_2473 | CH54_2472 | Hypothetical protein. | glyQ: glycine--tRNA ligase, alpha subunit; [J] COG0752 Glycyl-tRNA synthetase, alpha subunit. | 0.404 |
CH54_2473 | glyS | CH54_2473 | CH54_2471 | Hypothetical protein. | glyS: glycine--tRNA ligase, beta subunit; [J] COG0751 Glycyl-tRNA synthetase, beta subunit. | 0.404 |
CH54_2474 | CH54_2473 | CH54_2474 | CH54_2473 | Hypothetical protein. | Hypothetical protein. | 0.417 |
glyQ | CH54_2473 | CH54_2472 | CH54_2473 | glyQ: glycine--tRNA ligase, alpha subunit; [J] COG0752 Glycyl-tRNA synthetase, alpha subunit. | Hypothetical protein. | 0.404 |
glyQ | glyS | CH54_2472 | CH54_2471 | glyQ: glycine--tRNA ligase, alpha subunit; [J] COG0752 Glycyl-tRNA synthetase, alpha subunit. | glyS: glycine--tRNA ligase, beta subunit; [J] COG0751 Glycyl-tRNA synthetase, beta subunit. | 0.999 |
glyS | CH54_2473 | CH54_2471 | CH54_2473 | glyS: glycine--tRNA ligase, beta subunit; [J] COG0751 Glycyl-tRNA synthetase, beta subunit. | Hypothetical protein. | 0.404 |
glyS | glyQ | CH54_2471 | CH54_2472 | glyS: glycine--tRNA ligase, beta subunit; [J] COG0751 Glycyl-tRNA synthetase, beta subunit. | glyQ: glycine--tRNA ligase, alpha subunit; [J] COG0752 Glycyl-tRNA synthetase, alpha subunit. | 0.999 |