STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yihDConserved hypothetical protein; [S] COG3084 Uncharacterized protein conserved in bacteria. (89 aa)    
Predicted Functional Partners:
frsA
[R] COG1073 Hydrolases of the alpha/beta superfamily; Belongs to the UPF0255 family.
  
     0.760
yijD
Hypothetical protein.
  
     0.740
yafD
endonuclease/Exonuclease/phosphatase family protein; [S] COG3021 Uncharacterized protein conserved in bacteria.
  
     0.714
yiiS
Conserved hypothetical family protein; [S] COG3691 Uncharacterized protein conserved in bacteria.
  
     0.707
CH54_99
Conserved hypothetical protein; [R] COG3150 Predicted esterase; Belongs to the UPF0227 family.
  
     0.681
yfbU
yfbU domain protein; [S] COG3013 Uncharacterized conserved protein; Belongs to the UPF0304 family.
  
     0.664
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
  
     0.662
CH54_1163
Hypothetical protein.
  
     0.657
yejM
Type I phosphodiesterase / nucleotide pyrophosphatase family protein; [R] COG3083 Predicted hydrolase of alkaline phosphatase superfamily.
  
     0.656
mobB
mobB: molybdopterin-guanine dinucleotide biosynthesis protein B; [H] COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein.
 
   
 0.639
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.