STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpQ_2[C] COG0584 Glycerophosphoryl diester phosphodiesterase. (246 aa)    
Predicted Functional Partners:
glpQ
[C] COG0584 Glycerophosphoryl diester phosphodiesterase.
     
 0.918
pldB
Prolyl oligopeptidase family protein; [I] COG2267 Lysophospholipase.
    
 0.901
ugpE
Binding--dependent transport system inner membrane component family protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
  
 0.865
ugpA_2
Binding--dependent transport system inner membrane component family protein; [G] COG1175 ABC-type sugar transport systems, permease components.
 
  
 0.852
ugpC_3
ABC transporter family protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
  
  
 0.803
CH54_2825
Bacterial extracellular solute-binding family protein; [G] COG1653 ABC-type sugar transport system, periplasmic component.
 
    0.681
glpA
glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit; [C] COG0578 Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.674
CH54_647
[C] COG0584 Glycerophosphoryl diester phosphodiesterase.
  
     0.668
glpD
FAD dependent oxidoreductase family protein; [C] COG0578 Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.660
ugpQ_1
FMN-dependent dehydrogenase family protein; [C] COG0584 Glycerophosphoryl diester phosphodiesterase.
  
     0.629
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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